OpenMS  3.0.0
AScore.h File Reference
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class  ProbablePhosphoSites
class  AScore
 Implementation of the Ascore For a given peptide sequence and its MS/MS spectrum it identifies the most probable phosphorylation-site(s). For each phosphorylation site a probability score is calculated. The algorithm is implemented according to Beausoleil et al. (Nat. Biotechnol. 2006). More...


 Main OpenMS namespace.

Class Documentation

◆ OpenMS::ProbablePhosphoSites

class OpenMS::ProbablePhosphoSites
Collaboration diagram for ProbablePhosphoSites:
Class Members
Size AScore
Size first
Size peak_depth filtering level that gave rise to maximum discriminatory score
Size second
Size seq_1 index of best permutation with site in phosphorylated state
Size seq_2 index of permutation with site in unphosphorylated state