OpenMS  3.0.0
CompleteLinkage.h
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31 // $Maintainer: Mathias Walzer $
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34 //
35 #pragma once
36 
37 #include <vector>
38 #include <set>
39 #include <cmath>
40 
44 
45 namespace OpenMS
46 {
57  class OPENMS_DLLAPI CompleteLinkage :
58  public ClusterFunctor, public ProgressLogger
59  {
60 public:
61 
64 
66  CompleteLinkage(const CompleteLinkage & source);
67 
69  ~CompleteLinkage() override;
70 
72  CompleteLinkage & operator=(const CompleteLinkage & source);
73 
84  void operator()(DistanceMatrix<float> & original_distance, std::vector<BinaryTreeNode> & cluster_tree, const float threshold = 1) const override;
85 
87  static ClusterFunctor * create();
88 
90  static const String getProductName();
91 
92  };
93 
94 }
ClusterFunctor.h
DistanceMatrix.h
OpenMS::CompleteLinkage
CompleteLinkage ClusterMethod.
Definition: CompleteLinkage.h:57
OpenMS::String
A more convenient string class.
Definition: String.h:58
OpenMS
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47
OpenMS::ProgressLogger
Base class for all classes that want to report their progress.
Definition: ProgressLogger.h:52
ProgressLogger.h
OpenMS::DistanceMatrix
A two-dimensional distance matrix, similar to OpenMS::Matrix.
Definition: DistanceMatrix.h:67
OpenMS::ClusterFunctor
Base class for cluster functors.
Definition: ClusterFunctor.h:53