OpenMS  3.0.0
ConsensusIDAlgorithmIdentity.h
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31 // $Maintainer: Hendrik Weisser $
32 // $Authors: Andreas Bertsch, Marc Sturm, Sven Nahnsen, Hendrik Weisser $
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34 
35 #pragma once
36 
38 
39 namespace OpenMS
40 {
52  class OPENMS_DLLAPI ConsensusIDAlgorithmIdentity :
54  {
55  protected:
58 
68  virtual void preprocess_(std::vector<PeptideIdentification>& ids);
69 
78  virtual double getAggregateScore_(std::vector<double>& scores,
79  bool higher_better) = 0;
80 
81  private:
84 
87 
89  void apply_(std::vector<PeptideIdentification>& ids,
90  const std::map<String, String>& se_info,
91  SequenceGrouping& results) override;
92  };
93 
94 } // namespace OpenMS
95 
OpenMS::ConsensusIDAlgorithmIdentity
Abstract base class for ConsensusID algorithms that compare only identical sequences.
Definition: ConsensusIDAlgorithmIdentity.h:52
OpenMS::ConsensusIDAlgorithm::SequenceGrouping
std::map< AASequence, HitInfo > SequenceGrouping
Mapping: peptide sequence -> (charge, scores)
Definition: ConsensusIDAlgorithm.h:103
OpenMS
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47
ConsensusIDAlgorithm.h
OpenMS::ConsensusIDAlgorithm
Abstract base class for all ConsensusID algorithms (that calculate a consensus from multiple ID runs)...
Definition: ConsensusIDAlgorithm.h:59