OpenMS  3.0.0
EDTAFile.h
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31 // $Maintainer: Chris Bielow $
32 // $Authors: Chris Bielow $
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34 
35 #pragma once
36 
40 #include <OpenMS/KERNEL/Feature.h>
41 #include <OpenMS/FORMAT/TextFile.h>
42 
43 #include <fstream>
44 #include <vector>
45 
46 namespace OpenMS
47 {
84  class OPENMS_DLLAPI EDTAFile
85  {
86 public:
88  EDTAFile();
90  virtual ~EDTAFile();
91 
92 private:
96  double checkedToDouble_(const std::vector<String> & parts, Size index, double def = -1);
97 
101  Int checkedToInt_(const std::vector<String> & parts, Size index, Int def = -1);
102 
103 public:
112  void load(const String & filename, ConsensusMap & consensus_map);
113 
121  void store(const String & filename, const ConsensusMap & map) const;
122 
123 
131  void store(const String & filename, const FeatureMap & map) const;
132  };
133 } // namespace OpenMS
134 
TextFile.h
OpenMS::EDTAFile
File adapter for Enhanced DTA files.
Definition: EDTAFile.h:84
OpenMS::String
A more convenient string class.
Definition: String.h:58
Feature.h
ConsensusMap.h
OpenMS::Size
size_t Size
Size type e.g. used as variable which can hold result of size()
Definition: Types.h:127
OpenMS::Int
int Int
Signed integer type.
Definition: Types.h:102
OpenMS
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47
Exception.h
OpenMS::ConsensusMap
A container for consensus elements.
Definition: ConsensusMap.h:82
OpenMS::FeatureMap
A container for features.
Definition: FeatureMap.h:98
String.h