OpenMS  3.0.0
IsobaricQuantifierStatistics.h
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31 // $Maintainer: Timo Sachsenberg $
32 // $Authors: Stephan Aiche, Chris Bielow $
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34 
35 #pragma once
36 
37 #include <OpenMS/CONCEPT/Types.h>
38 
39 #include <map>
40 
41 namespace OpenMS
42 {
43  class String;
44 
48  class OPENMS_DLLAPI IsobaricQuantifierStatistics
49  {
50  public:
55 
59  void reset();
60 
69  std::map<String, Size> empty_channels;
70 
73 
76  };
77 } // namespace
OpenMS::IsobaricQuantifierStatistics::number_ms2_total
Size number_ms2_total
total number of MS2 spectra
Definition: IsobaricQuantifierStatistics.h:67
Types.h
OpenMS::IsobaricQuantifierStatistics::iso_solution_different_intensity
double iso_solution_different_intensity
absolute intensity difference between both solutions (for channels > 0)
Definition: IsobaricQuantifierStatistics.h:65
OpenMS::Size
size_t Size
Size type e.g. used as variable which can hold result of size()
Definition: Types.h:127
OpenMS::IsobaricQuantifierStatistics
Statistics for quantitation performance and comparison of NNLS vs. naive method (aka matrix inversion...
Definition: IsobaricQuantifierStatistics.h:48
OpenMS::IsobaricQuantifierStatistics::iso_number_ms2_negative
Size iso_number_ms2_negative
number of MS2 spectra where one or more channels had negative solution
Definition: IsobaricQuantifierStatistics.h:62
OpenMS::IsobaricQuantifierStatistics::iso_number_reporter_different
Size iso_number_reporter_different
number of channels >0 where naive solution was different; happens when naive solution is negative in ...
Definition: IsobaricQuantifierStatistics.h:64
OpenMS
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47
OpenMS::IsobaricQuantifierStatistics::iso_number_reporter_negative
Size iso_number_reporter_negative
number of channels where naive solution was negative
Definition: IsobaricQuantifierStatistics.h:63
OpenMS::IsobaricQuantifierStatistics::iso_total_intensity_negative
double iso_total_intensity_negative
only for spectra where naive solution is negative
Definition: IsobaricQuantifierStatistics.h:66
OpenMS::IsobaricQuantifierStatistics::channel_count
Size channel_count
4plex, 6plex, or 8 plex?!
Definition: IsobaricQuantifierStatistics.h:61
OpenMS::IsobaricQuantifierStatistics::number_ms2_empty
Size number_ms2_empty
number of empty MS2 (no reporters at all)
Definition: IsobaricQuantifierStatistics.h:68
OpenMS::IsobaricQuantifierStatistics::empty_channels
std::map< String, Size > empty_channels
Channel_ID -> Missing; indicating the number of empty channels from all MS2 scans,...
Definition: IsobaricQuantifierStatistics.h:69