OpenMS  3.0.0
SpectrumAccessTransforming.h
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31 // $Maintainer: Hannes Roest $
32 // $Authors: Hannes Roest $
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34 
35 #pragma once
36 
37 #include <OpenMS/config.h>
39 
40 namespace OpenMS
41 {
42 
47  class OPENMS_DLLAPI SpectrumAccessTransforming :
49  {
50 public:
51 
53 
54  ~SpectrumAccessTransforming() override = 0;
55 
56  boost::shared_ptr<ISpectrumAccess> lightClone() const override = 0;
57 
58  OpenSwath::SpectrumPtr getSpectrumById(int id) override;
59 
60  OpenSwath::SpectrumMeta getSpectrumMetaById(int id) const override;
61 
62  std::vector<std::size_t> getSpectraByRT(double RT, double deltaRT) const override;
63 
64  size_t getNrSpectra() const override;
65 
66  OpenSwath::ChromatogramPtr getChromatogramById(int id) override;
67 
68  size_t getNrChromatograms() const override;
69 
70  std::string getChromatogramNativeID(int id) const override;
71 
72 protected:
74 
75  };
76 
77 }
78 
79 
ISpectrumAccess.h
OpenMS::SpectrumAccessTransforming
An abstract base class implementing a transforming wrapper around spectrum access.
Definition: SpectrumAccessTransforming.h:47
OpenMS
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47
OpenMS::SpectrumAccessTransforming::sptr_
OpenSwath::SpectrumAccessPtr sptr_
Definition: SpectrumAccessTransforming.h:73
OpenSwath::OSSpectrumMeta
Identifying information for a spectrum.
Definition: openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:175
OpenSwath::ISpectrumAccess
The interface of a mass spectrometry experiment.
Definition: openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:50
OpenSwath::SpectrumAccessPtr
boost::shared_ptr< ISpectrumAccess > SpectrumAccessPtr
Definition: openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:87
OpenSwath::SpectrumPtr
boost::shared_ptr< Spectrum > SpectrumPtr
Definition: openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:296
OpenSwath::ChromatogramPtr
boost::shared_ptr< Chromatogram > ChromatogramPtr
Definition: openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:172
OpenMS::DIM_UNIT::RT
RT in seconds.