OpenMS  3.0.0
TargetedExperimentHelper.h File Reference
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Classes

struct  Configuration
 
struct  CV
 
struct  Protein
 
class  RetentionTime
 This class stores a retention time structure that is used in TargetedExperiment (representing a TraML file) More...
 
class  PeptideCompound
 Base class to represent either a peptide or a compound. More...
 
class  Compound
 Represents a compound (small molecule) More...
 
class  Peptide
 Represents a peptide (amino acid sequence) More...
 
struct  Peptide::Modification
 
struct  Contact
 
struct  Publication
 
struct  Instrument
 
struct  Prediction
 
struct  Interpretation
 Product ion interpretation. More...
 
struct  TraMLProduct
 Represents a product ion. More...
 

Namespaces

 OpenMS
 Main OpenMS namespace.
 
 OpenMS::TargetedExperimentHelper
 This class stores helper structures that are used in multiple classes of the TargetedExperiment (e.g. ReactionMonitoringTransition and IncludeExcludeTarget).
 

Functions

OpenMS::AASequence getAASequence (const Peptide &peptide)
 helper function that converts a Peptide object to a AASequence object More...
 
void setModification (int location, int max_size, String modification, OpenMS::AASequence &aas)
 helper function that sets a modification on a AASequence object More...