OpenMS  2.6.0
Public Member Functions | Public Attributes | List of all members
PeptideAndProteinQuant::ProteinData Struct Reference

Quantitative and associated data for a protein. More...

#include <OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h>

Collaboration diagram for PeptideAndProteinQuant::ProteinData:

Public Member Functions

 ProteinData ()=default
 constructor More...

Public Attributes

std::map< String, SampleAbundancesabundances
 mapping: peptide (unmodified) -> sample -> abundance More...
std::map< String, SampleAbundancespsm_counts
SampleAbundances total_abundances
 mapping: sample -> total abundance More...
SampleAbundances total_psm_counts
 spectral counting-based abundances More...
SampleAbundances total_distinct_peptides
 number of distinct peptide sequences More...
Size psm_count = 0
 total number of PSMs mapping to this protein More...

Detailed Description

Quantitative and associated data for a protein.

Constructor & Destructor Documentation

◆ ProteinData()

ProteinData ( )


Member Data Documentation

◆ abundances

std::map<String, SampleAbundances> abundances

mapping: peptide (unmodified) -> sample -> abundance

◆ psm_count

Size psm_count = 0

total number of PSMs mapping to this protein

◆ psm_counts

std::map<String, SampleAbundances> psm_counts

◆ total_abundances

SampleAbundances total_abundances

mapping: sample -> total abundance

◆ total_distinct_peptides

SampleAbundances total_distinct_peptides

number of distinct peptide sequences

◆ total_psm_counts

SampleAbundances total_psm_counts

spectral counting-based abundances